#' and plots a cluster tree with sample heatmap. It also identifies samples with too many entries and zero variance. #' The function goodSamplesGenes iteratively identifies samples and genes with too ...

When 'fill' has a color defined in config.scene, the dendrogram examples (dendrogram and dendrogram_radial) has the scene rectangle filled in to the specified color. However, the rectangle is much ...

Balances have become a cornerstone of compositional data analysis. However, conceptualizing balances is difficult, especially for high-dimensional data. Most often, investigators visualize balances ...

Cluster heatmaps are widely used in biology and other fields to uncover clustering patterns in data matrices. Most cluster heatmap packages provide utility functions to divide the dendrograms at a ...

ICPP '24: Proceedings of the 53rd International Conference on Parallel Processing This paper introduces Pandora, a parallel algorithm for computing dendrograms, the hierarchical cluster trees for ...

Abstract: The aim of this paper is to study methods of agglomerative hierarchical clustering which are based on the model of bag of words with text mining applications. In particular, a multiset ...